| Gene | F5I10.16 |
| Putative Identification | receptor (similar to receptor-linked protein kinases) |
| Position | 82262 - 85879, from the initial methionine to the termination codon |
| Strand | - |
| EST match | none |
| Database match | A. thaliana hypothetical protein |
CDS: The table below lists the coordinates of the exons for F5I10.16
Exon |
Range |
| 1 | 85028 - 85879 |
| 2 | 84328 - 84876 |
| 3 | 82262 - 83218 |
Protein sequence of F5I10.16
MGDQKTLSYDKSNKPFYSSSSSPCSFTAIVVFLIFVSYLLYSFSFISFLNPYSPSKSPNS LLVPVIRLGSGQTPEEQTELKHIVFGIAASSDLWKHRREYVKTWWKPNGVMNGAVWLDKP INDTVSSSSALPQIRISSDTSSFKYRYRNGHRSAIRITRIVSETVRMLNGTEAERNVRWV VMGDDDTVFFTENLVRVLRKYDHKQFYYIGAPSESHLQNLHQFSYGMAYGGGGFAISYPL AKVLEKMQDRCIERYSDLYGSDDRIHACMAELGVPLTKEVGFHQFDVYGNLLGLLSVHPQ APIVSIHHLDVVDPIFPKTNRVNALKKLMIPAKLDSASLVQQSVCYDKSHQWTMSISWGY TVQITRTYMPARMMEVPTRTFNDWHLRSDFTNLAFNTRPVTWTDCQRPRVFYFSHAFSNS SSSDTTTISQYLRHDEWYPKCEWGIADPSEINQIFVYKKPTPDRWSKVVIRFVPSKDSNF AFVNAIEVISAPKDLIGDVATSVSHDGTEKFNGLAKQAMEVVYRVNVGGRKVTPFNDTLW RTWVTDEGFLKTGDGSSEKSYFTGRIKYRRGGASREVGPDNVYNTARVGKRSNGLVDMSW GFKVNVGYKYLIRMHFCDIASKSLGRLYFNVYINGNLAYEDFDISYAADNVLASPYYIDF VVDATADDNNPSGSSITVSVGPSNKTSVDGNGVDAILNGVEIMKMNNSMGSLDGYVSTEM ILSTCPNRRNLSIFIAMLAFMCIFMSFYIVTQRKRVKDQYGWTKLSMDVLEDNSKSGNQF TARKA
Multiple sequence analysis of receptor and receptor-like proteins. F5I10.16 is similar to the receptor portion of the C. roseus receptor-like ser/thr protein kinase CrPK1. The catalytic domain of this kinase is highlighted. F5I10.16 is also similar to two other Arabidopsis proteins. These are a hypothetical protein from the FCA3 contig and protein yUP8H12.11. The complete CrPK1 sequence is not presented in this alignment.
1 60
AtFCA3hp MNQTRRKRRPDSSLSRLDSLSPEMLFPAKSPSLTSSRIRNIFLLLIFCFI.....IYIIF
yUP8H12.11 ~~~~~~~~~~~~~~MCLPFRPVSKTYYSSSSSTIVTRMVNCILLFVFILL.....VYLLI
F5I10.16 ~~~~~~~~~~MGDQKTLSYDKSNKPFYSSSSSPCSFTAIVVFLIFVSYLLYSFSFISFLN
61 120
AtFCA3hp S....YGTNFRREQISSIARSLS.VFSTRRRHLLFSIAASHDSWLRRSSYVRLWYSPES.
yUP8H12.11 SASRLQSKNSIHAYFSSSDQDQS.QSPTKIEHIVFGIGSSAISWRARREYVKLWWDAQK.
F5I10.16 PYSPSKSPNSLLVPVIRLGSGQTPEEQTELKHIVFGIAASSDLWKHRREYVKTWWKPNGV
121 180
AtFCA3hp TRAVVFLDRGGLES.....DLTLPPVIVS....KDVSRFPYNFPGGLRSAIRVARVVKET
yUP8H12.11 MRGCVFVERPLPSSQNHTDSYLLPPGTVKSNRPNETSVYRYTWRGGDRNAIRIARCVLET
F5I10.16 MNGAVWLDKPI..NDTVSSSSALPQIRISS....DTSSFKYRYRNGHRSAIRITRIVSET
181 240
AtFCA3hp V...D..RGDKDVRWFVFGDDDTVFFVDNLVTVLSKYDHRKWFYVGSNSEFYDQNV.RYS
yUP8H12.11 VRLFN..TSSEEVRWYVFGDDDTIFIPENLARTLSKYDHTSWYYIGSTSEIYHQNS.MFG
F5I10.16 VRMLNGTEAERNVRWVVMGDDDTVFFTENLVRVLRKYDHKQFYYIGAPSESHLQNLHQFS
241 300
AtFCA3hp FDMAFGGGGFAISASLAKVLAKVLDSCLMRYSHMYGSDSRIFSCVAELGVTLTHEPGFHQ
yUP8H12.11 HDMAFGGGGYALSSSLANVLARNFDSCIERYPHLYGGDSRVYACVLELGVGLSKEPGFHQ
F5I10.16 YGMAYGGGGFAISYPLAKVLEKMQDRCIERYSDLYGSDDRIHACMAELGVPLTKEVGFHQ
301 360
AtFCA3hp IDVRGNIFGLLCAHPLSPLVSLHHLDAVDPFFPKRNRTESVAHLIGAASFDSGRILQQSV
yUP8H12.11 FDVRGNALGILTSHSTRPLVSLHHMAHIDPIFPNSTTFSAVRHLFSAVQLDPLRIFQLSV
F5I10.16 FDVYGNLLGLLSVHPQAPIVSIHHLDVVDPIFPKTNRVNALKKLMIPAKLDSASLVQQSV
CrPK1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~MRILIQEMLIRTLFFFYLIISSL
361 420
AtFCA3hp CYDSLNTVTVSVVWGYAVQV.............YEGNKL.LPDLLTLQKTFSTWRRGSGV
yUP8H12.11 CYDRWYSWTISVSWGYTVQVNTFLPFFVQDSNNIDGRHLFLRDVLRAQETFRPWQKSGGL
F5I10.16 CYDKSHQWTMSISWGYTVQIT.........RTYMPARMMEVP.....TRTFNDWHLRSDF
CrPK1 EFTPENNYLINCGSFNDTSIDD........RIFLADNLNSTVLSTPETIFANSSNSNSVL
421 480
AtFCA3hp QSNYMFSTREYPRDPCGRPLVFFLDSVGSDGTEGTWSNYNIHRVGHC..HRAEAVERLER
yUP8H12.11 ASVYTFNTREIHRDPCQRPVTFYMQHVSSSSHDGTIKSVYKQAYENCTYDPVTSPRKIHE
F5I10.16 .TNLAFNTRPVTWTDCQRPRVFYFSHAFSNSSSSDTTTISQYLRHDEWYPKC.......E
CrPK1 DLYKSARIFNGSSQYNFSINKKGWHWIRLHFFPFPISNEKFNLSSAKSVFAQN......F
481 540
AtFCA3hp IRVLSPKLERNVEQVGFINTDRFS.VKVPSILPGFTFFFGFLKIKCQMGLPRRQCCDISS
yUP8H12.11 IRVFSRRLDPNIRQQSPLEKIIF*~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
F5I10.16 WGIADPSEINQIFVYKKPTPDRWS.KVVIRFVPSKDSNFAFVNAIEVISAPKDLIGDVAT
CrPK1 TLLKDFQPLNNVPVVKEFSLNVNSNNLLLKFTPSRNS.LAFLNGLEVISLPDELI...PF
541 600
AtFCA3hp PYNKSMVINIRQCMPDELIAMNT*~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
yUP8H12.11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
F5I10.16 SVSHDGTEKFNGLAKQAMEVVYRVNVGGRKVTPFNDTLWRTWVTDEGFLKTGDGSSEKSY
CrPK1 SIGNQNLE......KNALETVVRVNMGNVTVSSKDDPLGRIWLSDYNYLSNVNLVVFVSN
601 660
AtFCA3hp ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
yUP8H12.11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
F5I10.16 FTGRIKYRRG..GASREVGPDNVYNTARVGKR...SNGLVDMSWGFKVNVGYKYLIRMHF
CrPK1 I.HLVNYTKGEEKVSENIGPSSVYGTGTKLHSVFDPNTQINATWLFNVDSGFGYFIRFHF
661 720
AtFCA3hp ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
yUP8H12.11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
F5I10.16 CDIASK.SLGRLYFNVYINGNLAYEDFDISYAADNVLASPYYIDFVVDATADDNNPSGSS
CrPK1 CNLLNPIPNNNFFFNVFLNSEFVVKDLNLSTS.....GAPMYKDVVVVTNV......VPQ
721 780
AtFCA3hp ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
yUP8H12.11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
F5I10.16 ITVSVGPSNKTSVDGNGVDAILNGVEIMKMNNSMGSLDGYVSTEMILSTCPNRRNLSIFI
CrPK1 IRISVGPSN...VRNSYPDGILNGLEIMKISTSDGSL.AAVDADFPSSSSSSKLKVWIIV
781 840
AtFCA3hp ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
yUP8H12.11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
F5I10.16 AMLAFMCIFMSFYIVTQRKRVKDQYGWTKLSMDVLEDNSKSGNQFTARKA*~~~~~~~~~
CrPK1 SLAIGISLILVVFTVVFLFRRRKRHVMIHSTPDHLTEEDDSNSSIFSRSKIGYRFPLAVV
841 900
AtFCA3hp ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
yUP8H12.11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
F5I10.16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CrPK1 QEATDNFSENRVIGIGGFGKVYKGVFKDGTKVAVKRGISCSSSKQGLSEFRTEVELLSQF...
written 7 Jan 98
Larry Parnell