| Gene | F5I10.18 |
| Putative Identification | hypothetical protein |
| Position | 70745 - 74984, from the initial methionine to the termination codon |
| Strand | - |
| EST match | none |
| Database match | Arabidopsis hypothetical proteins |
CDS: The table below lists the coordinates of the exons for F5I10.18
Exon |
Range |
| 1 | 74152 - 74984 |
| 2 | 71472 - 72414 |
| 3 | 71238 - 71378 |
| 4 | 70745 - 71149 |
Protein sequence of F5I10.18
MDKTSQLPDELLVKVLSFLPTKDAVRTSLLSMRWKSLWMWLPKLEYDFRHYSVSEGQGLA RFITLSLLGHKAPAIESLSLKLRYGAIGSIKPEDIYLWVSLAVHDSNVRELSLKLCTFAE RPTKLPKSLYKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVTYSDEDSLHRLLSNC PVLEDLVVERDRIDNLGKLSVVVKSLQRLTLKMSCPCHLDGIMMNTPSLKYLKVTDERQE SDSDNESDSDSPRYFYDFEDMPKLEEADFVLTFQNIKKDGISGLPDAMICHILSFLPTKV AASTTVLAKRWKPLLAFMPNLDFDESFRFDPRMTCEERRKGSESFMLVVDSVLALQAEAN ATLNKFYVKCEGVEQNSVLEWIPKVLKRGVLDIDLQIPSSRGFGSNSTFYPLPSEIFVSK TLVRLKIQFQDGANVNVEGDVSLPMLKTLHLDYVKMDTRMLQKLLSGCHTLEELLLMNLI WKESSEPEPCFVSVSVRTLKILKFSRFENFMKAKDFKPIVLLSFDIPNLVYLEYLDTIAD KYEQVRFDSLVKASIGLCKTSKQIENDNNNVTKLFMGICNVTILYLTEDTLKVLGCCRET MPVFENLIHLTIRTGVHIGWKSLPHLLKNCPNLQTLVFEGMHHIYRKGRACGDVDEDGTC MCKNLDNMRVKKDIDACLSSSPVKVIKILNFGELCGFCEFCDVEEDVAGQIKQVKQFLET MPDLEKVILYYNTPEDEDVMKVFKKLKKLPRVASAKCEVQIISDNINLSFTFR
Multiple sequence analysis of Arabidopsis hypothetical proteins similar to F5I10.18. Sequences of five hypothetical proteins are aligned. These sequences originate from FCA contigs 0 and 2, and BACs F5I10 and T32N15. All sequences are encoded by chromosome IV genes, with the exception of T32N15.1, which comes from chromosome V.
1 60
F5I10.18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
AtFCA2hp MTLTADYKGEYETDGADDSYSFDFKDMPNLEEADISSTYPDIYKFVRSVTSVKRLSLCIR
61 120
F5I10.18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
AtFCA2hp VNAEEALYPDGIVFNQLENLKLCPCDSNWSKLFVRLLKYSPNLRELEVSLNEGHTKCCVD
121 180
F5I10.18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
AtFCA2hp PQVSLENQLNFVPECLLSSLQTFKWTGIHGSLKVMDLAKYILRNARCLKTATILFQPALE
181 240
F5I10.18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~MDKTSQLPDELLV
AtFCA2hp TERETMIQELLLSFRGSTTQSVFMSTVRESWLKPKKNIQTNLGDYEDMDKISRLPDDLLV
241 300
AtFCA0hpA ~~~MAFRRPLIVIVIFIYITAGVKIAAADEPVPTPWPHQFHALMFMNYSGDLSMIDLWYD
F5I10.18 KVLSFLPTKDAVRTSLLSMRWKSLWMWLPKLEYDFRHYSVSEGQGLARFITLSLLGHKAP
AtFCA2hp KVLLFLPTKIAVSTSILSKRWEFLWMWLPKLEYHNTNYSASEEQRLRSFINLNLQLHRAP
301 360
AtFCA0hpA WTNGRNFNIIQEQLGGITYDLEWNNGTSFFYTLDESKSCRSGQLEDSHCVRFEFFILSRK
F5I10.18 AIESLSLKLRYGAIGSIKPEDIYLWVSLAVHDSNVRELSLKLCTFAERPTKLPKSLYKCK
AtFCA2hp IIESLRLKFSLGR..SIKPQNIKQWIIIAVFRC.VRD......................K
361 420
AtFCA0hpA LKYLRRVGEFSVLLKSGRVYILIVTNTLCALHLMGRLKLPNHSGREAHIMTYEVGAVLED
F5I10.18 SIVILKLKDEILVDVPRKVCLPSLKTLFLGRVTYSDEDSLHRLLSNCPVLEDLVVERDRI
AtFCA2hp SLVILKLKDQILVDVPRMAYLPSLKYLLLKRVTYKDSNSLHQLLSSCPVLKNLVVERDEY
421 480
AtFCA0hpA EKWQAPVYCFNKEKKSLSTKGALSEFKGYKEKAALRSTRVNKRDLLLCLFSLFEQVLNLH
F5I10.18 DNLGKLSVVVKSLQRLTLKMSCPCHLDGIMMNTPSLKYLKVTDERQESDSDNESDSDSPR
AtFCA2hp NHDETLSITVSSLQRLTLKISRGGSFDELVINTPSLKYFKLTDYLGECETELDDDS....
481 540
AtFCA0hpA KTATNHHAFRLVFRKLKKMDLSGCRDIISSLPEAISCHILSFLPTKEAASTSVLSKKWRY
AtFCA0hpB ~~~~~~~~~~~~~~~~~~~~~~~~MDHVSSLPDEVLYHILSFLTTKEAALTSILSKRWRN
T32N15.1 ~~~~~~~~~~~~~~~VPLGMSSVSTASLNCLPDELLVHVLSSLETKQAASTSVLSKRWRT
F5I10.18 YFYDFEDMPKLEEADFVLTFQNIKKDGISGLPDAMICHILSFLPTKVAASTTVLAKRWKP
AtFCA2hp YSYVFKDMPKLEEAHIDSTYPDIGKFVRSITSVKRLSLCVKVNAEEALYREGICFKQLEH
541 600
AtFCA0hpA LFAFVPNLDLDESVYLNP....ENETEVSSSFMDFVDRVLALQ..GNSPLHKFSLKIGDG
AtFCA0hpB LFTFVPNLDIDDSVFLHPQEGKEDRYEIQKSFMKFVDRVLALQ..GNSPIKKLSLKLRTG
T32N15.1 LFAVRRNLDFDDSIISHPEVGEQNMDDVQESFRDFVDKRLAFQ..GSVPINKFSLIYGDK
F5I10.18 LLAFMPNLDFDESFRFDPRMTCEERRKGSESFMLVVDSVLALQAEANATLNKFYVKC.EG
AtFCA2hp LKLCPCDSNWSKLLARLLKDSPNLRELEIKLNKVYFSIESFSFG*~~~~~~~~~~~~~~~
601 660
AtFCA0hpA VEPDRIIPWINNVLERGVSDLDLHVYMETEF.....V..FPSEMFLSKTLVRLKLMLYPL
AtFCA0hpB FDSHRVDGWISNALARGVTELDLLI...................ILNLVTLKLNSVRVDW
T32N15.1 HDDVRVDRWINTALEHGVSELHLCLTSVTRR.....LHRFPSNVFRSTTLVKLTLGTNLF
F5I10.18 VEQNSVLEWIPKVLKRGVLDIDLQIPSSRGFGSNSTFYPLPSEIFVSKTLVRLKIQFQDG
661 720
AtFCA0hpA L.EF..EDVYLPKLKTLYIDSCYFEKYGIGL.TKLLSGCPILEDLVLDDIPW.CTWD...
AtFCA0hpB L.AA..GDIFLPMLKTLVLHSVRLCVDNVNWGGKDVNVSNASLKILTVNYNI.CLGT...
T32N15.1 I.VYFPSDTCLPVLKILVLDSIWF..DRIKFSNVLLAGCPALEDLTIDQKSFPGLPN...
F5I10.18 ANVNVEGDVSLPMLKTLHLDYVKMDTRMLQ...KLLSGCHTLEELLLMNLIWKESSEPEP
721 780
AtFCA0hpA .FASVSVPTLKRLTFSTQVRD....EFPKSVSIDT..PNLVYLKFTDTVAGKYPKGHQG.
AtFCA0hpB .F.SVDTPSLVYFCFTEYVAI....DYPVVIMQNL.FEARISLLVTQDQIERARAPNID.
T32N15.1 .VVSSKTVKSLSIVYKYSADF....DWFRTVALDT..PNLVTLLYSTYARHRYRHCNLES
F5I10.18 CFVSVSVRTLKILKFSRFENFMKAKDFKPIVLLSFDIPNLVYLEYLDTIADKYEQVRFDS
781 840
AtFCA0hpA .........YGENDMV...GNATDFIMRICNVKTLYLSSNTLQVLTYSCD.AIPIFNNLT
AtFCA0hpB .........WVEDDVVLRLVNMEKLIKGIRNVQYMYLSPNTLEVLSLCCE.SMPVFNNLK
T32N15.1 LVNATLDLHFLENCDEAFEPNVTDLMIAVRNVQMLHLTSSATEVISQCCKGGLPMFKNLL
F5I10.18 LVKASIGLCKTSKQIENDNNNVTKLFMGICNVTILYLTEDTLKVLG.CCRETMPVFENLI
841 900
AtFCA0hpA HLTIESNPEVGWQS.LPGLLKNSPNLETLIFQGLIHKATDK..CGDV.....CLCKPRE.
AtFCA0hpB SLTLKSHKSRGWQA.MPVLLRNCPHLETLVLEGILHHVTDK..CGYA.....CDCVSRE.
T32N15.1 VLVFLGNTERVWKVFLPLLLEHSPNLTKLCLESLF.LILQG..LYHG.....TDEDEFD.
F5I10.18 HLTIRTGVHIGWKS.LPHLLKNCPNLQTLVFEGMHHIYRKGRACGDVDEDGTCMCKNLDN
901 960
AtFCA0hpA .....EIRSCLASSPVKVIKILKFGEIS.........DDMEKQREQIKYFLETMPNLEKM
AtFCA0hpB .....EKGCSLTSCPVKVLEIKGF.............RGTIKEMHMIKHFVNYFPCLMET
T32N15.1 .....EIHIP.RSNKVNMLRIIQ....C.........QGTENELKHISHFLLKMECLQLV
F5I10.18 MRVKKDIDACLSSSPVKVIKILNFGELCGFCEFCDVEEDVAGQIKQVKQFLETMPDLEKV
961 1020
AtFCA0hpA ILYYNTTSVED..VTEVSSRLQRLVSKLASSTLLKRMDLSGSRDVISSLPDDISSHILSF
AtFCA0hpB NIYIEESGPPKLRVPQVCEFIAEMMEHYGKSSSFNVQLLVGGYLYKKWTAQ*~~~~~~~~
T32N15.1 QVNFSETIVDSKKV.QLTEDLMKLPSASSRLTMQVI*~~~~~~~~~~~~~~~~~~~~~~~
F5I10.18 ILYYNT..PEDEDVMKVFKKLKKLPRVASAKCEVQIISDNINLSFTFR*~~~~~~~~~~~
1021 1080
AtFCA0hpA LPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEISTSFMDFVDRVLALQVRI
1081 1140
AtFCA0hpA IPWINNVLERGVSDLDLHLNLESEFLLPSQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKL
1141 1200
AtFCA0hpA KTLYIEATHFEEHGVGLTKLLSGCPMLEDLVLDDISWFIWDFASVSVPTLKRLRFSWQER
1201 1260
AtFCA0hpA DEFPKSVLLDTPNLVYLKFTDTVAGKYPKPLLINYHQGYGENDMVGNATDFIMRICNVKT
1261 1320
AtFCA0hpA LYLSANTLQVLTYSCDAIPIFNNLTHLTIESNPRVGWQSVPGLLKNSPNLETLIFQVRNK
1321 1358
AtFCA0hpA PLKSILASSTKPHIDVEMCACAKSLGRRFSVANHQVR*
written 7 Jan 98
Larry Parnell