| Gene | F5I10.22 |
| Putative Identification | hypothetical protein |
| Position | 41940 - 44429, from the initial methionine to the termination codon |
| Strand | - |
| EST match | F14071; F14072 and Z26823 are very similar |
| Database match | hypothetical protein from Sorghum bicolor |
CDS: The table below lists the coordinates of the exons for F5I10.22
Exon |
Range |
| 1 | 43479 - 44429 |
| 2 | 43261 - 43422 |
| 3 | 43057 - 43146 |
| 4 | 42369 - 42923 |
| 5 | 41940 - 42170 |
Protein sequence of F5I10.22
MDISDEESEISESEIEEYSKTPYHLLRSETYYKVKVNGRLRCPFCVGKKKQDYKYKELHA HATGVSKGSATRSALQKSNHLALAKFLENDLAGYAEPLPRPPVVPPLLDETEPNPHNVYV WPWMGIVVNPLKETDDKELLLDSVYWLQTLSKFKPVEVNAFWVEQDSIVGVIAKFDSDWS GFAAATELEKEFETQGSCKKEWTERSGDSESKAYGWCARADDFQSQGPIGEYLSKEGTLR TVSDILQNNVQDRNTLLDVLSNMIDMTNEDLNKAQHSYNRTAMSLQRVLDEKKNLHQAFA EGIYSHTDMFPTHIAFRMSLRHIQRILYDKEKLRNELDRKMRDLESRAKQLEKHEALTEL ERQKLDEDKRKSDAMNKSLQLASREQKKADESVLRLVEEHQLDTKQTLEMEIQELKGKLQ VMKHLGDDDDEAVQTKMKEMNDELDDKKAELEDLESMNSVLMTKERQSNDEIQAARQKMI AVQISNALVFLGTDRVAFLPLSSILEYSKDCSLIQGLTGLLGAESDIGVKRMGELDEKPF LDVCKLRYSANEARVEAATLCSTWKENLKNPSWQPFKREGTGDGAEEVVDEDDEQLKKLK REWGKEVHNAVKAALVEMNEYNASGRYPTSELWNFKEGRKATLKEVITFISTDIKNLKRK RT
Comparison to hypothetical protein from Sorghum bicolor. Presented is a portion of the output from BLASTP analysis, showing the match to S. bicolor hypothetical protein. F5I10.22 is also similar to Arabidopsis F2N1.10 and rice open reading frames between putative ADP-glucose pyrophosphorylase subunit SH2 and putative NADPH-dependent reductase A1.
gi|2735841 (AF010283) No definition line found [Sorghum bicolor]
Length = 895
Score = 406 bits (1033), Expect = e-112
Identities = 237/630 (37%), Positives = 357/630 (56%), Gaps = 76/630 (12%)
Query: 33 KVKVNGR-LRCPFCVGKKKQDYKYKELHAHATGVSKGSATRSALQKSNHLALAKFLENDL 91
KVK NG C FC KKK +Y L HA+GVS + R A +K+ H AL K+L+NDL
Sbjct: 6 KVKNNGENYSCLFCSSKKKNNYSKSSLVQHASGVS-AAPNRKAKEKAAHRALFKYLKNDL 64
Query: 92 AGYAEPLPRPPVVPPLLDETEPNPHNVYVWPWMGIVVNPLKETDDKELLLDSVYWL-QTL 150
A +EP P+V P+ + N +VWPWMGI+VN E D + +S L + L
Sbjct: 65 AKSSEP---QPLVIPVEPQPLQNRDEKFVWPWMGILVNVPTEWKDGRQIGESGNRLKEQL 121
Query: 151 SKFKPVEVNAFWVEQDSIVGVIAKFDSDWSGFAAATELEKEFETQGSCKKEWTERSGDSE 210
S F P++V W + I +F DW+GF A E F G KK+WT +
Sbjct: 122 SHFCPLKVIPLWTFRGHTGNAIVEFGKDWNGFRNARTFESHFAAGGFGKKDWTGKKNQG- 180
Query: 211 SKAYGWCARADDFQSQGPIGEYLSKEGTLRTVSDILQNNVQDRNTLLDVLSNMIDMTNED 270
S+ YGW ARA+D+ S G I +YL K G L++V+D+ + + + L+ L+N I++ N
Sbjct: 181 SELYGWLARAEDYNSPGIIADYLRKNGDLKSVNDLAKEGARKTDRLVANLANQIEVKNRY 240
Query: 271 LNKAQHSYNRTAMSLQRVLDEKKNLHQAFAEGIYSHTDMFPTHIAFRMSLRHIQRILYDK 330
L + + Y+ T SL++++ +++ L Q++ E I +++ RH Q+++ +
Sbjct: 241 LQELESKYSETTASLEKMMGQREQLLQSYNEEISKMQ---------QLARRHSQKVIDEN 291
Query: 331 EKLRNELDRKMRDLESRAKQLEKHEALTELERQKLDEDKRKSDAMNKSLQLASREQKKAD 390
+KLR+EL+ KM DL+ R+KQL++ A ++ +R+ L+++K+K+ + L+LA+ EQ+KAD
Sbjct: 292 QKLRSELEAKMNDLDVRSKQLDELAAKSDYDRRNLEQEKQKNAIKSSHLKLATLEQQKAD 351
Query: 391 ESVLRLVEEH-----------QLDTKQTLEMEIQELKGKLQVMKHLGDDDDEAVQTKMKE 439
E+VL+L E+H QLD KQ LE+EIQ+LKGKL+VM+H+ D+D A + K+ E
Sbjct: 352 ENVLKLREKHAALKKILMLEQQLDAKQKLELEIQQLKGKLKVMEHMPGDEDSASKNKINE 411
Query: 440 MNDELDDKKAELEDLESMNSVLMTKERQSNDEIQAARQKMIAVQISNALVFLGTDRVAFL 499
+++ L +K EL+ +ES+N L+ KE +SN E+Q AR+++ V
Sbjct: 412 LSEALQEKIDELDGMESLNQTLVIKESKSNIELQEARKELENV----------------- 454
Query: 500 PLSSILEYSKDCSLIQGLTGLLGAESDIGVKRMGELDEKPFLDVCKLRYSANEARVEAAT 559
C ++ IG+KRMGELD K F C+ + +A V AA
Sbjct: 455 -----------CG-----------QAHIGIKRMGELDLKAFSKACQ-KERTEDAEVTAAF 491
Query: 560 LCSTWKENLKNPSWQPFKREGTGDGAEEVVDEDDEQLKKLKREWGKEVHNAVKAALVEMN 619
LCS W+ +KNP W PF+ E + EDD +L+ LK E G+E++ V AL+E+N
Sbjct: 492 LCSKWEAEIKNPDWHPFRVE---------IIEDDAKLRALKEEHGEEIYALVTKALLEIN 542
Query: 620 EYNASGRYPTSELWNFKEGRKATLKEVITF 649
EY + G YP ELWNFKE RK TLKE + F
Sbjct: 543 EYKSKGSYPVGELWNFKENRKVTLKEAVQF 572
written 8 Jan 98
Larry Parnell