CDS:  The table below lists the coordinates of the exons for F5I10.4

Protein sequence of F5I10.4

MVHATKSATTIPKERLKNRIVFHDGRLAQRPTPLNAIITYLWLPFGFILSIIRVYFNLPL
PERFVRYTYEMLGIHLTIRGHRPPPPSPGTLGNLYVLNHRTALDPIIVAIALGRKICCVT
YSVSRLSLMLSPIPAVALTRDRATDAANMRKLLEKGDLVICPEGTTCREEYLLRFSALFA
ELSDRIVPVAMNCKQGMFNGTTVRGVKFWDPYFFFMNPRPSYEATFLDRLPEEMTVNGGG
KTPIEVANYVQKVIGAVLGFECTELTRKDKYLLLGGNDGKVESINNTKK

Comparison of F5I10.4 to the region downstream of frohA. Shown below is a portion of the BLAST output indicating the similarity between F5I10.4 and two open reading frames found downstream of frohA on the opposite strand.

 emb|Y09581|ATFROHABG A.thaliana frohA and frohB genes
             Length = 15202

 Score =  285 bits (721), Expect = 6e-76

Query: 1     MVHATKSATTIPKERLKNRIVFHDGRLAQRPTPLNAIITYLWLPFGFILSIIRVYFNLPL 60
             MVH TKSATT+P E LKNRI+FHDGRL QRPTPLNA+I YLWLPFGF+LS+ RVYFNLPL
Sbjct: 14895 MVHETKSATTVPIESLKNRIIFHDGRLVQRPTPLNALIIYLWLPFGFMLSVFRVYFNLPL 14716

Query: 61    PERFVRYTYEMLGIHLTIRGHRPPPPSPGTLGNLYVLNHRTALDPIIVAIALGRKICCVT 120
             PERFVRYTYE+LGIHLTIRGHRPPPPSPG  GNLYVLNHRTALDPII+AIALGRKI CVT
Sbjct: 14715 PERFVRYTYEILGIHLTIRGHRPPPPSPGKPGNLYVLNHRTALDPIIIAIALGRKITCVT 14536

Query: 121   YSVSRLSLMLSPIPAVALTRDRATDAANMRKLLEKG 156
             YSVSRLSLMLSPIPAVALTRDR  DAA MR+LLEKG
Sbjct: 14535 YSVSRLSLMLSPIPAVALTRDRVADAARMRQLLEKG 14428


 Score =  272 bits (689), Expect = 4e-72

Query: 156   GDLVICPEGTTCREEYLLRFSALFAELSDRIVPVAMNCKQGMFNGTTVRGVKFWDPYFFF 215
             GDLVICPEGTTCRE YLLRFSALFAELSDRIVPVAMNCKQGMFNGTTVRGVKFWDPYFFF
Sbjct: 14168 GDLVICPEGTTCREPYLLRFSALFAELSDRIVPVAMNCKQGMFNGTTVRGVKFWDPYFFF 13989

Query: 216   MNPRPSYEATFLDRLPEEMTVNGGGKTPIEVANYVQKVIGAVLGFECTELTRKDKYLLLG 275
             MNPRPSYEATFLDRLPEEMTVNGGGKTP EVANYVQKVIG VLGFECTELTRKDKYLLLG
Sbjct: 13988 MNPRPSYEATFLDRLPEEMTVNGGGKTPFEVANYVQKVIGGVLGFECTELTRKDKYLLLG 13809

Query: 276   GNDGKVESINNTK 288
             GNDGKVESIN TK
Sbjct: 13808 GNDGKVESINKTK 13770

written 7 Jan 98
Larry Parnell