| Gene | F6P23.12 |
| Putative Identification | bZIP-like protein |
| Position | 63954 to 66335, from the initial methionine to the termination codon |
| Strand | - |
| EST match | none |
| Database match | A. thaliana bZIP-like protein T7I23.5 |
CDS: The table below lists the exon coordinates for F6P23.12 and which gene prediction program selected the 3' and 5' termini (GS = GenScan, Gr = GRAIL, M = MZEF).
| Exon | Range | 3' | 5' |
| 1 | 65366 to 66335 | Gr | Gr |
| 2 | 65096 to 65313 | GS,Gr,M | Gr,M |
| 3 | 64902 to 64985 | Gr | GS,Gr,M |
| 4 | 63954 to 64691 | GS,Gr | Gr |
Complete CDS of F6P23.12
ATGGATTCTGGGTCGGGTCATCTCGATTTCGATTCGGATTCTGACTCTGACGACGATGAT GATATTGATTCGTTGCATTCATCTCCTCTCCATCATCATCTAGAAGATGATGACTCGAAT CCGAAATCGTATTTGCATATGAATTATATGAAGAATAGTTATATGCCTCCTTCTTTGGTT TATGAGCAGAGACCTTCGAGTCCTCAGAGAGTTCATTTCGGTGAATCATCATCATCATCA ACCTCTGAGTATAATCCATATCTGAATTCGAACTACGGATCGAAATTGCCTCCGCCGCCA CCGTCGCCGCCGAGGGAAAAGGTTTGGGATTTCTTAGACCCTTTTGATACGTATTATACT CCGTATACTCCTAGTCGTGATACGAGAGAGTTAAGAGATGAATTGGGTGTTCCGGATTTA GAGGAAGATGATGTAGTTGTTAAGGAAGTACATGGGAAACAGAAATTTGTAGCTGCAGTT TCTGTGGAAGAGCCGTTAGGTAACTCCGGTGCTAGCACTAGCGGAGGAGGAGGAGGAGGA GGTAAGGCTTCTTTGTATCAGACTAGGCCAAGTGTGTCAGTTGAGAAAGAAGAAATGGAG CATGAGGTTCATATTGTGGAGAAAAAAATTGTTGAGGATAGTGGTGGGGATGAGGTGAGG AAGAGTAAGGCTGCGGTGGCACGTGGTGGTGGCGGTGTCAGACGTGGGGTTCCTGAGGTT GCGAAAGAGATAGAAGCTCAGTTCTTGAGAGCTGCAGAGTCAGGAAATGAGATCGCAGTG ATGCTTGAAGTGGGGAAACATCCATATGGTCGCAAAAATGGTAGCTTTCATCATCTCTTA TTTCATTATTTTTTTTCCTTATTTGGAGATTGTGTTGCAGAAAGTTTGCTTCTTTGTAGA AATCAGTTGAATATTTATTATGGTTTTGTGTCAATATATGATTCTGTTGCCACTATTGTC AGCTTGTTGTTTTCTTCGAAGAAGCTATATGAGGGGACCCCATCACCGTCTGTGGTTTCG TCAGCTCAATCATCAACCTCCAAAAAAGCTAAAGCTGAAGCCTCTTCTTCAGTGACTGCT CCTACTTATGCAGACATTGAGGCAGAGCTTGCTTTAAAGTCTCGTAATCTTTCTTCGACA TTGCACAAGCTCCACCTTTGGGAGAAGAAGCTTTACGATGAGGTCAAGGCCGAGGAAAAA ATGCGTGTAAACCATGAGAAAAAGTTAAGGAAGCTTAAGCGTATGGATGAAAGAGGTGCC GAGAATCAAAAAATGCTAACTCCATCTTTCAGGCTTAGCAAAATGTGGAAATCCATGCTT GAGTGCCATAAAAGTCAGTGTGAGGCTATTAAGGAAGCCAGAGGTTTAGGCCCCATTAGA GCAAGCAAAAATTTTGGTGGGGAGCATCTCGAGGTAACAAGGACGCTTGGATATGAACTT ATAAATTGGATTGTGGGATTTTCGAGTTGGGTTAGTGCGCAAAAGGGTTTTGTAAGAGAG CTGAATAGTTGGCTTATGAAGTGTCTTTTCTATGAACCTGAGGAAACTCCAGATGGAATC GTTCCTTTTTCTCCTGGTCGTATTGGGGCTCCAATGATTTTCGTGATCTGTAACCAGTGG GAACAAGCTCTAGATAGAATATCAGAAAAGGAAGTTATCGAGGCTATACGCCGTTTCACA ACGAGTGTGCTTCATCTTTGGGAACAAGATAGGTTAGCAACCCGGGAGAGGATTATAGGG CATGGTGATCCTAGGAATATGGACCGAGAGGAACAGAGAATACAGAAAGAGATTCAAGAA TTGGAAATGAAAATGGTTCTGGTTGGTCCAGGGGAAGATAACATTGTCTACCAAAGCGAC ACTAGTAACGAGAGTTTACAGGGTAGTCTTCAACGTATATTTGAAGCTATGGAGAGGTTT ACAGAGGAATCTCTGAAAGCTTATGTAGATCTCTTACATCGTGCTGAAGAAGAAGAATGC GACTCTCGGGAAACAGATGAAGAAGACTAA
Protein translation:
MDSGSGHLDFDSDSDSDDDDDIDSLHSSPLHHHLEDDDSNPKSYLHMNYMKNSYMPPSLV YEQRPSSPQRVHFGESSSSSTSEYNPYLNSNYGSKLPPPPPSPPREKVWDFLDPFDTYYT PYTPSRDTRELRDELGVPDLEEDDVVVKEVHGKQKFVAAVSVEEPLGNSGASTSGGGGGG GKASLYQTRPSVSVEKEEMEHEVHIVEKKIVEDSGGDEVRKSKAAVARGGGGVRRGVPEV AKEIEAQFLRAAESGNEIAVMLEVGKHPYGRKNGSFHHLLFHYFFSLFGDCVAESLLLCR NQLNIYYGFVSIYDSVATIVSLLFSSKKLYEGTPSPSVVSSAQSSTSKKAKAEASSSVTA PTYADIEAELALKSRNLSSTLHKLHLWEKKLYDEVKAEEKMRVNHEKKLRKLKRMDERGA ENQKMLTPSFRLSKMWKSMLECHKSQCEAIKEARGLGPIRASKNFGGEHLEVTRTLGYEL INWIVGFSSWVSAQKGFVRELNSWLMKCLFYEPEETPDGIVPFSPGRIGAPMIFVICNQW EQALDRISEKEVIEAIRRFTTSVLHLWEQDRLATRERIIGHGDPRNMDREEQRIQKEIQE LEMKMVLVGPGEDNIVYQSDTSNESLQGSLQRIFEAMERFTEESLKAYVDLLHRAEEEEC DSRETDEED*
Alignment of A. thaliana bZIP protein with two bZIP-like proteins: T7I23.5 and F6P23.12.
1 60
T7I23.5 MGCTASKLDSEDAVRRCKERRRLMKDAVYARHHLAAAHSDYCRSLRLTGSALSSFAAGEP
AtbZIP ~~~~~~~~~~~~~~~~~~~~~~~~~~~~MRRHH...........................
F6P23.12 MDSGSGHLDFDSDSDSDDDDDIDSLHSSPLHHHLEDDDSNPKSYLHMNYMKNSYMPPSLV
61 120
T7I23.5 LSVSENTP.....AVFLRPSSSQDAPRVPSSHSPEPPPPPIRSKPKPTRPRRLPHILSDS
AtbZIP ..........................................QQPSP.....MPQV....
F6P23.12 YEQRPSSPQRVHFGESSSSSTSEYNPYLNSNYGSKLPPPPPSPPREKVWDFLDPFDTYYT
121 180
T7I23.5 SPSSSPATSFYPTAHQNSTYSRSPSQASSVWNWENFYPPSPPDSEYFERKARQNHKHRPP
AtbZIP ..........YGGAEQ............................................
F6P23.12 PYTPSRDTRELRDELGVPDLEEDDVVVKEVHGKQKFVAAVSVEEPLGNSGASTSGGGGGG
181 240
T7I23.5 SDYDAETERSDHDYCHSRRDAAEEVHCSEWGDDHDRFTATSSSDGDGEVETHVSRSGIEE
AtbZIP SKYDK.........................ADD.....ATISSGS........YRGG...
F6P23.12 GKASLYQTRPSVSVEKEEMEHEVHIVEKKIVEDSGGDEVRKSKAAVARGGGGV.RRGVPE
241 300
T7I23.5 EPVKQPHQDPNGKEHSDHVTTSSDCYKTKLVVRHKNLKEIL.DAVQDYF.DKAASAGDQV
AtbZIP ......................GDIADMKMVVRHRDLKEII.DAIKENF.DKAAASGEQV
F6P23.12 VAKEIEAQFLRAAESGNEIAVMLEVGKHPYGRKNGSFHHLLFHYFFSLFGDCVAESLLLC
301 360
T7I23.5 SAMLEI..GRAELDRSFSKL......RKTVYH...SSSVFSNLSASWTSKPPLAVKYKLD
AtbZIP SQMLEL..GRAELDRSFSQL......KKTVIH...SSSLLINLSSTWTSKPPLAVKYRID
F6P23.12 RNQLNIYYGFVSIYDSVATIVSLLFSSKKLYEGTPSPSVVSSAQSSTSKKAKAEASSSVT
361 420
T7I23.5 ASTLNDEQG....GLKSLCSTLDRLLAWEKKLYEDVKAREGVKIEHEKKLSALQSQEYKG
AtbZIP TTAL.DQPN....SSKSLCSTLDRLLAWEKKLYEEIKAREGFKIEHEKKLSQLQSQEYKG
F6P23.12 APTYADIEAELALKSRNLSSTLHKLHLWEKKLYDEVKAEEKMRVNHEKKLRKLKRMDERG
421 480
T7I23.5 E........................AVLTTSNAILRLRDTDLVPQLVELCHGLMYMWKSM
AtbZIP EDEAKLDKTKASITRLQSLIIVTSQAVTTTSTAIIRLRDTDLVPQLVELCHGFMYMWKSM
F6P23.12 AE.....................NQKMLTPS...FRLSK................MWKSM
481 540
T7I23.5 HEYHEIQNNIVQQVRGLINQTERGESTSEVHRQVTRDLESAVSLWHSSFCRIIKFQREFI
AtbZIP HQYHETQNSIVEQVRGVINRSGKGESTSELHRQATRDLESAVSSWHSSFSSLIKFQRDFI
F6P23.12 LECHKSQCEAIKEARGL.GPIRASKNFGGEHLEVTRTLGYELINWIVGFSSWVSAQKGFV
541 600
T7I23.5 CSLHAWFKLSL......VPL...SNGDPKKQRPDSFALCEEWKQSLERAEEVKMKKRTES
AtbZIP HSVHAWFKLTL......LPVWQQHAANHHKEPLDAYAFCDEWKLALDRI........PDT
F6P23.12 RELNSWLMKCLFYEPEETPDGIVPFSPGRIGAPMIFVICNQWEQALDRISEKEVIEAIRR
601 660
T7I23.5 AGKELEKKASSLRSIERKYYQAYSTVGIGPGPEVLDSRDPLSEKKCELAACQRQVEDEVM
AtbZIP VASE.ESRASSTLSRDIRKQADDTR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
F6P23.12 FTTSVLHLWEQDRLATRERIIGHGDPRNMDREEQRIQKE.IQELEMKMVLVGPGEDNIVY
661 712
T7I23.5 RHVKAVEVTRAMTLNNLQTGLPNVFQALTSFSSLFTESLQTVCSRSYSIN*~~
AtbZIP ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
F6P23.12 QSDTSNESLQGSLQRIFEAMERFTEESLKAYVDLLHRAEEEECDSRETDEED*
written 19 Oct 97
Larry Parnell