| Gene | F6P23.6 |
| Putative Identification | hypothetical protein |
| Position | 19696 to 23795, from the initial methionine to the termination codon |
| Strand | + |
| EST match | none |
| Database match | no annotated gene, but shows similarity to a segment of chromosome IV BAC T17A5 |
CDS: The table below lists the coordinates for each F6P23.6 exon and which gene prediction programs selected the exon termini (GS = GenScan, Gr = GRAIL, M = MZEF).
| Exon | Range | 5' | 3' |
| 1 | 19696 to 20877 | GS,Gr | GS |
| 2 | 21445 to 21504 | GS | GS,M |
| 3 | 21884 to 21981 | GS | GS |
| 4 | 22276 to 22361 | GS | GS |
| 5 | 22500 to 22642 | GS | GS,Gr |
| 6 | 22731 to 23795 | GS,Gr | GS,Gr |
Complete CDS of F6P23.6
ATGGTGGATTGGTCTACACTACCGAAGGATCTTTTAGACCTAATTTCAAAATCTCTAGAA TCTTCCTTCGATCTCATCCAATTCCGTTCCGTTTGTTCTTCATGGCGATCCGCCGCCGAG CCGAAAAGTCCTCTTCCAACACATCATCTCCCGATCCTCCCCGATAACGGGGGGAGTCTC TTCCCTGATTCCGCCGTTGGTTTCCGTCTCTCGCAGCGGAGTATCTTACTTATCAAGCCT CATGAACCGTGTATCGAATCGGATTCGTTTGGATGGTTGATCAAAGTCGAGGAAGATCTT AATGTTCCTCGTAAGGTGACTCTTTTAGATCCGTTATGTGATACAAGAAACTCAATTCCT GAGAATTTCCCTCGTGTTCTCGATATGTCCAAGTTTAAGGTTCGAGAATTGGGTCGTGAA TTCAAGCTTCATTATTTCAATACTGTTGGTGATATTGTAGAGAGTTTGTATTTGGAGAAA GCTGTTGTTAAGTATCTAGATTGTGATGGAGATTATAAATTTGTGTTGCTTACGATTCAT GTTTCGGGGAAGTTAGCTGTGTTTAGGTCTTGGGATCGAGCATGGACTGTGATTAATGAC ATGCCTTCTCCTTATGATGATGTGATGTTGTTCGATGGACGTTTCTTTGCGGTTGATAAC AACGGGAGGACTGTGGTTGTGGATTACAGTTCCTTGAAGTTGACGTTGGTTGCGAGTCCT GTGTTTGGTGGTGATAAGAAGTTTTTGATTGAATCTTGTGGTGAAATGTTGCTTGTTGAT ATGTACTTGAGCTTAGAGGCAGTGGAAGGGGATCCTGGATTTGTTGAGGAGATTTTCGAG CATCCTGCGTTTTATATGAATGAGAGAACAGTCAAATTTAAAGTGTATAGATTTGTGGAA AGAGAGGAGAGTTGGGTTGATGTTTACGATCTTGAGGATAAGATGTTGTTCCTTGGTGAT GATTCCACCTTTTCTGCTTCAGCTTCCGATATATTACCTCTATGTGATGGAAGCTCTGTG TTCTTCAACGGTAATGTCTTCAATGGGGAAGACTTGGGTGCGATGCAAGATCGAGATTTG GGAGTGTTTGACTTCAGGAGTGGGAAAATAGAGCTAGTGCAAAAACTCCCTGAATATGCT AAGCTGTTTTGGCCTCCACCTCCTTGGATAACTTCTCATGCGAATGATGTTCGTCGGAGA TTCCAACTCATGTTATCTCCAAAACAATTTGCGACACTTACGTGGTTTAAAAGTTTTCCC CTTTTTTCTGATTACTGTTGTATAGACAAGAAACTAGAATTGTTGAAAACGAATTCCGGT TTAGGTTCTTATTGGGTAAGACACAAAGCTCTGAACCAGATGACAAGTAGCAGTAACAGC GGCTTGCGACGGTTCCTGTTCACTCCGCCTCAGCGGCTAAGCCAAGCCTTAGCTGGTGAT CCGTCAGCGATAAACCGACACATTAAGAAGTTTGTGGCTGCTTCACCCAAATCAGTTGCT CTCAATGTCCTCTCTCATCTCCTCTCTGATCAAACTTCCCATCCTCATCTCTCCTTCTTT GCTCTGTCTTTGTATTCGGAAATTACTGAAGCGTCGTGGTTTGATTGGAATCCTAAACTC ATTGCTGAACTTATTGCTTTGCTCAATAAACAAGAAAGATTTGATGAATCAGAAACGCTA CTTTCTACTGCGGTTTCGAGACTGAAGTCAAATGAAAGAGACTTTACTCTCTTCCTCTGC AATTTGGTTGAATCAAATTCTAAACAAGGGTCTATACAAGGTTTCAGTGAAGCATCTTTT CGTTTGAGAGAGATAATCCAAAGATCATCATCAGTTTATGTCAAAACTCAAGCTTACAAG TCTATGGTTTCTGGATTATGTAACATGGACCAGCCTCATGATGCGGAAAGAGTTATCGAG GAGATGAGAATGGAAAAAATAAAGCCGGGATTGTTTGAATATAAGTCTGTTCTATACGGC TATGGAAGATTAGGATTGTTTGACGATATGAACAGAGTAGTACACAGAATGGGAACAGAA GGTCACAAAATCGACACAGTTTGTTCAAATATGGTTCTCTCTTCCTATGGAGCTCATGAT GCATTGCCCCAAATGGGTTCTTGGTTACAGAAGTTGAAGGGTTTTAATGTTCCTTTCTCC ATAAGGACGTATAACTCGGTCTTGAATTCTTGTCCTACCATCATATCAATGTTGAAAGAC TTGGATAGCTGTCCGGTTTCTCTTTCTGAACTGCGTACTTTTCTGAATGAGGACGAAGCA CTTCTGGTCCATGAATTGACTCAGTCATCAGTTTTAGATGAAGCAATTGAGTGGAACGCG GTAGAGGGTAAGTTGGATTTACATGGTATGCACTTGAGCTCATCGTATTTGATATTGCTG CAATGGATGGATGAGACCAGACTTAGATTTAGCGAAGAAAAGTGTGTAATTCCTGCAGAG ATTGTAGTTGTTTCTGGATCTGGAAAGCATAGCAATGTAAGAGGAGAGTCACCGGTGAAA GCGCTGGTTAAAAAGATAATGGTGCGTACTGGAAGCCCGATGAGAATTGACCGGAAGAAT GTTGGTAGTTTTATTGCCAAGGGAAAAACTGTTAAAGAATGGCTCTGCAAATGA
Protein translation:
MVDWSTLPKDLLDLISKSLESSFDLIQFRSVCSSWRSAAEPKSPLPTHHLPILPDNGGSL FPDSAVGFRLSQRSILLIKPHEPCIESDSFGWLIKVEEDLNVPRKVTLLDPLCDTRNSIP ENFPRVLDMSKFKVRELGREFKLHYFNTVGDIVESLYLEKAVVKYLDCDGDYKFVLLTIH VSGKLAVFRSWDRAWTVINDMPSPYDDVMLFDGRFFAVDNNGRTVVVDYSSLKLTLVASP VFGGDKKFLIESCGEMLLVDMYLSLEAVEGDPGFVEEIFEHPAFYMNERTVKFKVYRFVE REESWVDVYDLEDKMLFLGDDSTFSASASDILPLCDGSSVFFNGNVFNGEDLGAMQDRDL GVFDFRSGKIELVQKLPEYAKLFWPPPPWITSHANDVRRRFQLMLSPKQFATLTWFKSFP LFSDYCCIDKKLELLKTNSGLGSYWVRHKALNQMTSSSNSGLRRFLFTPPQRLSQALAGD PSAINRHIKKFVAASPKSVALNVLSHLLSDQTSHPHLSFFALSLYSEITEASWFDWNPKL IAELIALLNKQERFDESETLLSTAVSRLKSNERDFTLFLCNLVESNSKQGSIQGFSEASF RLREIIQRSSSVYVKTQAYKSMVSGLCNMDQPHDAERVIEEMRMEKIKPGLFEYKSVLYG YGRLGLFDDMNRVVHRMGTEGHKIDTVCSNMVLSSYGAHDALPQMGSWLQKLKGFNVPFS IRTYNSVLNSCPTIISMLKDLDSCPVSLSELRTFLNEDEALLVHELTQSSVLDEAIEWNA VEGKLDLHGMHLSSSYLILLQWMDETRLRFSEEKCVIPAEIVVVSGSGKHSNVRGESPVK ALVKKIMVRTGSPMRIDRKNVGSFIAKGKTVKEWLCK*
Protein motifs:
A signature for multicopper oxidases is found in F6P23.6 from residue 650 to 670 [GLFEYKSVLYGYGRLGLFDDM]. This signature is found in many different oxidizing enzymes, but does not itself confer the ability of the protein to bind copper. Blood coagulation factors V and VIII, for example, do not possess the copper binding motif, but nonetheless belong to the family of multicopper oxidases.
written 18 Oct 97
Larry Parnell