Arabidopsis thaliana BAC T13L16 from chromosome II

Hybridizing YAC CIC8B10, from Goodman lab
Lister & Dean position
(from AtDB)
~33 cM, nearest marker is C425
GenBank entry AC003952

Download sequence of T13L16 via ftp

T13L16 overlaps with T17A5


Genes, transposons, and other regions of interest on BAC T13L16

Gene or Region Identification Position
T13L16.1 putative nuclear pore complex protein 371 - 2103
T13L16.2 hypothetical protein 3065 - 5225
Repeat similar to many genomic sequences 8860 - 9750
Repeat similar to many genomic sequences 9760 - 11000
T13L16.3 putative serine proteinase 13670 - 15241
Repeat genomic repeat found in FCA contig 3 and BAC T17A5 15775 - 15949
T13L16.4 hypothetical protein 20526 - 21463
T13L16.5 hypothetical protein 22111 - 39886
T13L16.6 putative zinc-finger protein, component of putative Tal-1-like retrotransposon 40369 - 41533
T13L16.7 putative reverse transcriptase, component of putative Tal-1-like retrotransposon 47666 - 50921
T13L16.8 putative Bop-like zinc-finger protein 51714 - 54456
T13L16.9 putative calcium-dependent ser/thr protein kinase 51714 - 54456
T13L16.10 putative DnaJ-like chaperonin 56683 - 57165
T13L16.11 putative glycine-rich, zinc-finger DNA-binding protein 59166 - 60258
T13L16.12 putative thaumatin-like pathogenesis-related protein 61323 - 62084
Repeat 320 bp repeat with flanking IRs and TDS 62570 - 62869
T13L16.13 putative senescence associated rhodanese-like protein 63632 - 64539
T13L16.14 putative physical impedence protein 66543 - 68418
T13L16.15 hypothetical protein 68896 - 70071
T13L16.16 putative histidine kinase 76379 - 81208
tRNA-Ile   81556 - 81629
overlap overlap with BAC T17A5 78137 - 83131
  simple repeats  

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updated 18 Jul 98
Larry Parnell