Gene:   predicted exons in region from 95452 to 97169
Putative Identification:   none
Position:   95452 to 97169
Strand:   -
EST match:   none
Database match:   none

This region of BAC T32N15 contains a few exons that are predicted by Grail and MZEF. They are not assembled into a polypeptide because of splicing problems, but are included here for viewing. The coordinates of the open reading frames within these exons, the predicting program, and a summary of the BLAST searches is presented below.


Exon	3' end   5' end		Program		Database match    
exon A	96888 to 97169		Grail		no database match
exon B	96888 to 97025		MZEF		no database match
exon C	96711 to 96752		MZEF & Grail	no database match
exon D	96248 to 96292		Grail		no database match
exon E	95740 to 95880		Grail		no database match
exon F	95599 to 95697		Grail		no database match
exon G	95452 to 95520		Grail		no database match


exon A
ATGCAAGAAATTCCCAGAAAAATCGTCCTTCTTCTTCTCTTCTTCTCTCTAATTCTCCCA
CCTTCCACACAAAACCCACAAGAAGAAATCTACTACTGTGGTAACACTCTAATCTCAAAC
CCATCTGAACTCATAACCTGCAGATCTGGAAAACTCTACTTCAAAAGCTCAACTGGTCTC
TTCCATGTCTCCGGAACAGAGGAAGTGAAATTAAGAGCTAGGGTGTCTATGGAAGTCGAA
GGTCACATACCGGACTTATGCATCGCTTGTGAGAGACCTAAGGgt

MQEIPRKIVLLLLFFSLILPPSTQNPQEEIYYCGNTLISNPSELITCRSGKLYFKSSTGL
FHVSGTEEVKLRARVSMEVEGHIPDLCIACERPK


exon B
agATCTGGAAAACTCTACTTCAAAAGCTCAACTGGTCTCTTCCATGTCTCCGGAACAGAG
GAAGTGAAATTAAGAGCTAGGGTGTCTATGGAAGTCGAAGGTCACATACCGGACTTATGC
ATCGCTTGTGAGAGACCTAAGGgt

SGKLYFKSSTGLFHVSGTEEVKLRARVSMEVEGHIPDLCIACERPK


exon C
agAGAATAAAGTTATCAACTTTGGAACCAAGTCTCGAGCTTTATCTGgt

NKVINFGTKSRALS


exon D
agGGAGTGTTCATGCTAGGAAAAGATTAGGAGATAACGCTAAGATTTTGgt

SVHARKRLGDNAKIL


exon E
agCTAGGGAGAACCATTACTCGCGTGACCTCTCCATATGAAGAGAGATATTTACACACCG
CCATCTCGATATCAATCACAGGAAGCAAAGTGTCATATCCAGTAACGTTTAGGCTTTGTT
CTTTGGTTCTTCTCTCAGCAAGAGCAGCACgt

RTITRVTSPYEERYLHTAISISITGSKVSYPVTFRLCSLVLLSARAA


exon F
agCTTTAACGATTGCAGTTCCACTAAGTTCCAATGCTTTCTCTTCAGCACCTTTTCCCTC
AATCCTCATGAAGGAAACACTCTTGATGGTACCCTTTTCAAAgt

FNDCSSTKFQCFLFSTFSLNPHEGNTLDGTLFK

LTIAVPLSSNAFSSAPFPSILMKETLLMVPFS


exon G
agGCATGAAGCTAAGTGTTATATCCCTCAATGGAAAACGGGTCATCACTATTCTTCAACTC
CAGCGATTTTAA

MKLSVISLNGKRVITILQLQRF*

created 29 Aug 97
Larry Parnell