Arabidopsis thaliana BAC T3F12 from chromosome IV, bottom arm

Hybridizing YAC CIC11E12
Lister & Dean position
(from AtDB)
~23 cM
GenBank entry AC002983

Download sequence of T3F12 via ftp

Fingerprint data indicate that opposite ends of T3F12 overlap with T15F16 and T10G4


Genes, transposons, and other regions of interest on BAC T3F12

Feature Identification Position
  similarity to ESTs 69 - 196
  similarity to mustard chloroplast Val-tRNA/16S rRNA 208 - 1145
  putative LINE element 5320 - 5636
  similarity to BAC F2P16 8389 - 8745
T3F12.1 phosphoglyceride transfer protein 12749 - 14160
  putative non-autonomous transposon similar to BAC F2N1 16140 - 16800
  putative non-autonomous transposon similar to BAC F2N1 and PAC MDJ22 19200 - 19902
Transposon similar to mudr transposon of maize 20819 - 23250
Transposon similar to BAC T21B4 and ESSA contig-3 23800 - 26400
T3F12.2 hypothetical protein 27471 - 28916
T3F12.3 hypothetical protein 30294 - 33101
T3F12.4 hypothetical protein 40267 - 44638
T3F12.5 hypothetical protein 50541 - 52362
T3F12.6 hypothetical protein 53722 - 58466
T3F12.7 sulfate transporter 59699 - 65201
repeat genomic repeat found in intron 9 of gene T3F12.7 62182 - 62530
T3F12.8 hypothetical protein containing a mudr-like transposon insertion 71627 - 76420
T3F12.9 hypothetical protein 76721 - 80618
repeat similar to centromere-linked repeat 82680 - 84105
  similar to BAC F19P19 and ESSA chromosome IV contig-1 86521 - 87397
  similar to the A. thaliana mitochondrial genome 90701 - 91279
  similar to BAC F20P5 93200 - 94300
overlap overlap with T15F16, oriented toward the centromere 95265 - 107183
T3F12.10 putative zinc finger protein 99046 - 101596
T3F12.11 microfibrillar-associated protein 101963 - 103491
  tandem repeats/microsatellites 7953 - 103176

Go to:  chromosome IV map  |  chromosome V map  |  chromosome IV sequence status page  |  home


updated 19 Jul 98
Larry Parnell