| Gene | T5J8.GA1 |
| Identification | ent-kaurene synthetase A |
| Position | 34857 - 41903 |
| Strand | - |
| EST match | none |
| Database match | Arabidopsis ent-kaurene synthetase A, U11034 |
| Genetic marker | GA1 |
| Biochemical reaction | catalyzes the conversion of geranylgeranyl pyrophosphate to copalyl pyrophosphate during gibberellin biosynthesis |
mRNA: Based on a comparison to cDNA U11034, the 5'-UTR extends from position 41857 to 41903 and the 3'-UTR extends from 34857 to 34970.
5'-UTR CTTCTTCACTAAATACTTAGACAGAGAAAACAGAGCTTTTTAAAGCC
3'-UTR TAACCTCATCATCATCATCGATCCATTAACAATCAGTGGATCGATGTATCCATAGATGCG
TGAATAATATTTCATGTAGAGAAGGAGAACAAATTAGATCATGTAGGGTTATCA
CDS: The table below lists the coordinates of the T5J8.GA1 exons and which exon prediction algorithms selected the 3' and 5' termini (GS = GenScan, Gr = GRAIL, M = MZEF, NPG = NetPlantGene - selects splice sites only, not exons)
| Exon | Range | 3' | 5' |
| 1 | 41760 - 41856 | GS | GS |
| 2 | 40866 - 40937 | GS, Gr, M, NPG | GS, M, NPG |
| 3 | 40668 - 40750 | GS, Gr, M, NPG | GS, Gr, M, NPG |
| 4 | 40078 - 40384 | GS, Gr, M, NPG | GS, Gr, M |
| 5 | 39641 - 39824 | GS, Gr, M, NPG | GS, Gr, M, NPG |
| 6 | 39228 - 39442 | GS, Gr, NPG | GS, Gr, NPG |
| 7 | 38986 - 39106 | GS, Gr, M, NPG | GS, Gr, M |
| 8 | 38794 - 38906 | Gr, M, NPG | Gr, M, NPG |
| 9 | 38485 - 38711 | GS, Gr, M, NPG | GS, Gr, M, NPG |
| 10 | 38157 - 38272 | GS, Gr, M, NPG | GS, Gr, M, NPG |
| 11 | 37701 - 37799 | Gr, NPG | Gr, NPG |
| 12 | 37183 - 37437 | GS, Gr, M, NPG | GS, Gr, M, NPG |
| 13 | 36120 - 36255 | GS, M, NPG | GS, Gr, M, NPG |
| 14 | 35448 - 35624 | GS, Gr, M, NPG | GS, Gr, M, NPG |
| 15 | 34971 - 35177 | GS, Gr | GS, Gr, NPG |
Complete CDS of T5J8.GA1
ATGTCTCTTCAGTATCATGTTCTAAACTCCATTCCAAGTACAACCTTTCTCAGTTCTACT AAAACAACAATATCTTCTTCTTTCCTTACCATCTCAGGATCTCCTCTCAATGTCGCTAGA GACAAATCCAGAAGCGGTTCCATACATTGTTCAAAGCTTCGAACTCAAGAATACATTAAT TCTCAAGAGGTTCAACATGATTTGCCTCTAATACATGAGTGGCAACAGCTTCAAGGAGAA GATGCTCCTCAGATTAGTGTTGGAAGTAATAGTAATGCATTCAAAGAAGCAGTGAAGAGT GTGAAAACGATCTTGAGAAACCTAACGGACGGGGAAATTACGATATCGGCTTACGATACA GCTTGGGTTGCATTGATCGATGCCGGAGATAAAACTCCGGCGTTTCCCTCCGCCGTGAAA TGGATCGCCGAGAACCAACTTTCCGATGGTTCTTGGGGAGATGCGTATCTCTTCTCTTAT CATGATCGTCTCATCAATACCCTTGCATGCGTCGTTGCTCTAAGATCATGGAATCTCTTT CCTCATCAATGCAACAAAGGAATCACGTTTTTCCGGGAAAATATTGGGAAGCTAGAAGAC GAAAATGATGAGCATATGCCAATCGGATTCGAAGTAGCATTCCCATCGTTGCTTGAGATA GCTCGAGGAATAAACATTGATGTACCGTACGATTCTCCGGTCTTAAAAGATATATACGCC AAGAAAGAGCTAAAGCTTACAAGGATACCAAAAGAGATAATGCACAAGATACCAACAACA TTGTTGCATAGTTTGGAGGGGATGCGTGATTTAGATTGGGAAAAGCTCTTGAAACTTCAA TCTCAAGACGGATCTTTCCTCTTCTCTCCTTCCTCTACCGCTTTTGCATTCATGCAGACC CGAGACAGTAACTGCCTCGAGTATTTGCGAAATGCCGTCAAACGTTTCAATGGAGGAGTT CCCAATGTCTTTCCCGTGGATCTTTTCGAGCACATATGGATAGTGGATCGGTTACAACGT TTAGGGATATCGAGATACTTTGAAGAAGAGATTAAAGAGTGTCTTGACTATGTCCACAGA TATTGGACCGACAATGGCATATGTTGGGCTAGATGTTCCCATGTCCAAGACATCGATGAT ACAGCCATGGCATTTAGGCTCTTAAGACAACATGGATACCAAGTGTCCGCAGATGTATTC AAGAACTTTGAGAAAGAGGGAGAGTTTTTCTGCTTTGTGGGGCAATCAAACCAAGCAGTA ACCGGTATGTTCAACCTATACCGGGCATCACAATTGGCGTTTCCAAGGGAAGAGATATTG AAAAACGCCAAAGAGTTTTCTTATAATTATCTGCTAGAAAAACGGGAGAGAGAGGAGTTG ATTGATAAGTGGATTATAATGAAAGACTTACCTGGCGAGATTGGGTTTGCGTTAGAGATT CCATGGTACGCAAGCTTGCCTCGAGTAGAGACGAGATTCTATATTGATCAATATGGTGGA GAAAACGACGTTTGGATTGGCAAGACTCTTTATAGGATGCCATACGTGAACAATAATGGA TATCTGGAATTAGCAAAACAAGATTACAACAATTGCCAAGCTCAGCATCAGCTCGAATGG GACATATTCCAAAAGTGGTATGAAGAAAATAGGTTAAGTGAGTGGGGTGTGCGCAGAAGT GAGCTTCTCGAGTGTTACTACTTAGCGGCTGCAACTATATTTGAATCAGAAAGGTCACAT GAGAGAATGGTTTGGGCTAAGTCAAGTGTATTGGTTAAAGCCATTTCTTCTTCTTTTGGG GAATCCTCTGACTCCAGAAGAAGCTTCTCCGATCAGTTTCATGAATACATTGCCAATGCT CGACGAAGTGATCATCACTTTAATGACAGGAACATGAGATTGGACCGACCAGGATCGGTT CAGGCCAGTCGGCTTGCCGGAGTGTTAATCGGGACTTTGAATCAAATGTCTTTTGACCTT TTCATGTCTCATGGCCGTGACGTTAACAATCTCCTCTATCTATCGTGGGGAGATTGGATG GAAAAATGGAAACTATATGGAGATGAAGGAGAAGGAGAGCTCATGGTGAAGATGATAATT CTAATGAAGAACAATGACCTAACTAACTTCTTCACCCACACTCACTTCGTTCGTCTCGCG GAAATCATCAATCGAATCTGTCTTCCTCGCCAATACTTAAAGGCAAGGAGAAACGATGAG AAGGAGAAGACAATAAAGAGTATGGAGAAGGAGATGGGGAAAATGGTTGAGTTAGCATTG TCGGAGAGTGACACATTTCGTGACGTCAGCATCACGTTTCTTGATGTAGCAAAAGCATTT TACTACTTTGCTTTATGTGGCGATCATCTCCAAACTCACATCTCCAAAGTCTTGTTTCAA AAAGTCTAG
Protein translation
MSLQYHVLNSIPSTTFLSSTKTTISSSFLTISGSPLNVARDKSRSGSIHCSKLRTQEYIN SQEVQHDLPLIHEWQQLQGEDAPQISVGSNSNAFKEAVKSVKTILRNLTDGEITISAYDT AWVALIDAGDKTPAFPSAVKWIAENQLSDGSWGDAYLFSYHDRLINTLACVVALRSWNLF PHQCNKGITFFRENIGKLEDENDEHMPIGFEVAFPSLLEIARGINIDVPYDSPVLKDIYA KKELKLTRIPKEIMHKIPTTLLHSLEGMRDLDWEKLLKLQSQDGSFLFSPSSTAFAFMQT RDSNCLEYLRNAVKRFNGGVPNVFPVDLFEHIWIVDRLQRLGISRYFEEEIKECLDYVHR YWTDNGICWARCSHVQDIDDTAMAFRLLRQHGYQVSADVFKNFEKEGEFFCFVGQSNQAV TGMFNLYRASQLAFPREEILKNAKEFSYNYLLEKREREELIDKWIIMKDLPGEIGFALEI PWYASLPRVETRFYIDQYGGENDVWIGKTLYRMPYVNNNGYLELAKQDYNNCQAQHQLEW DIFQKWYEENRLSEWGVRRSELLECYYLAAATIFESERSHERMVWAKSSVLVKAISSSFG ESSDSRRSFSDQFHEYIANARRSDHHFNDRNMRLDRPGSVQASRLAGVLIGTLNQMSFDL FMSHGRDVNNLLYLSWGDWMEKWKLYGDEGEGELMVKMIILMKNNDLTNFFTHTHFVRLA EIINRICLPRQYLKARRNDEKEKTIKSMEKEMGKMVELALSESDTFRDVSITFLDVAKAF YYFALCGDHLQTHISKVLFQKV*
written 9 Feb 98
Larry Parnell