Sites of Interest to Arabidopsis researchers

Table of Contents

This page contains links to web sites and pages having to do with Arabidopsis thaliana genome sequence analysis and related topics. The information is divided into the following categories:

• Arabidopsis Sequencing Sites
• Arabidopsis Genome Resources
• Other Plant Genome Resources
• General Genome Resources (searches and sequence analysis)
• Miscellaneous sites of interest

Arabidopsis Sequencing Sites

These are links to the groups participating in the international effort to sequence the Arabidopsis thaliana genome.

• Stanford/ University of Pennslyvania/ USDA Plant Genome Lab Consortium
• The Institute for Genomic Research
• John Innes Centre
• MIPS - Munich Information Center for Protein Sequences
• Kazusa Institute

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Arabidopsis Genome Resources

These sites containing data of interest related to Arabidopsis genome sequencing. They include Arabidopsis EST and physical mapping sites.

• Arabidopsis thaliana database (AtDB)
• TIGR EST Database
• U Minn. EST database
• U. Penn Mapping Center (Chromosome 1)
• Chromosomes IV and V YAC maps (data from the John Innes Center, displayed at AtDB)
• Goodman Lab Arabidopsis Genome Mapping and Sequencing (Chromosome II)

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Other Plant Genome Resources

These are plant genome resources that are not specifically dedicated to Arabidopsis.

• Maize Genome Database
• Agricultural Genome Information Server
• List of Plant Genome databases from USDA (very nice, check it out)

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General Genome Resources (searches and sequence analysis)

Sites of interest to those interested in genome reseach or sequence analysis not specifically limited to plants.

• Biologists control panel (Baylor College of Medicine - nice search capabilities)
• National Center for Biotechnology Information - GenBank
• Genome Sequencing Center at Washington University (lots of stuff, protocols, software, sequence searching)

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Miscellaneous sites of interest

Sites of interest to thos interested in biology or medicine.

• National Center for Biotechnology Information - Entrez Database

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Lita Annenberg Hazen Genome Center.
Cold Spring Harbor Lab. Revised: January 25, 2002.