Name intergenic spacer between 25S and 18S rDNAs
ID # ATR0032
Accession X15550
Copy # 670
Reference Gruendler P, et al. (1989) Nucleic Acids Res. 17: 6395-6396 and
Luschnig C, et al. (1993) Plant Mol. Biol. 22: 543-545
Note part of 10.5 kbp rDNA repeat existing in 2 clusters of ~3.5Mbp each on chromosomes II and IV

 

Sequence of 25S/18S spacer

CCCTCCCCTAAATCACTCCAAAAAAAACAATCCCCAATTCTACACAAGTGTTTCTACACT
AACAAAGCAACAGCTCCTTAACGAATTCCCAACTTTACACGAGCTCGTCTCTCGAGGTTA
AATGTTATTACTTGGTAAGATTCCGGACCTCGCCAAGTGTTTTGAAAACCCGCAACGCTC
GCAAAGGTGGATAGTGAGAATAATAAGTGAAGAGACAGACTTGTCCAAAACGCCCACCAC
GAAGGTGCATAGTGAGAAGAGTAAGTCAAGAGATAGACTTGTCCAAAAAGAAACGGAAGA
GAAAGCGTGGGGAGACGCTCACGAAGGTGCATAGTGAGAAGAGTAAGTCAAGAGACAGAC
TTGTTCGAAAAGAAACAGAAGAGAATGCTTGGGGTTACACTCACGAAGGTGCATAGTGAG
AAGAGTAAGTCAAGAGACAGACTTGTTCGAAAAGAAACAAAAGAGAATGCTTGGGGAGAT
AGAAGTGTGAGATAGTTCTCAAGCTAAGAAAGTTGTAAAAGCTAAGAACTAGCATCAAAT
GATGGATGAAACACAAGGTAGTTGTTGAAAAGTCAAACACTTGGTGATATGAACACAAAC
GTTCAATATGACAAACCCATGCCAAGTAAAGAGAAAATGAAAACTGGTGATTGTTGCGGA
AATCGTCCAGGATTCCTCGACCAGGACTTGAAATCGTCGAGGGGAAAAAATCGGTTCCGA
GGAATCGTCGATCCGGACTTGGAATCGTCGAGAAAAGTTTACCGGGTCCGAGGATTTGTC
GACCAGGAGTGGAAATCGTCGAGAAAAATCTATCGGGTCCGAGGAATCGTCGACCAGGAC
GAGGAATCGTCGACCGGGTCCGAGGATTTGTCGACCAGGGGTTGAAATCGTCGACCAGGT
CCGAGACTTCATCGACCGGGTCCGAGGATTCGTCGACCAGGAGTGGAAATCGTCGAGAAA
AATCTATCGGGTCCGAGGAATCGTCGACCAGGACGAGGAATCGTCGACCGGGTCCGAGGA
TTTGTCGACCAGGTCCGAGACTTCATCGACCGGGTCCGAGGATTCGTCGACCAGGTCCGA
GACTTCATCGACCGGGTCCAAGTATTTGATTTTATTTTGGAACCGGTGTCTCCTCAGACA
TTTCAATGTATGTTGGTGCCAAGAGGGAAAAGGGCTATAAAGCTATATAGGGGTGGGTGT
GTGTAGTGGGAATTTTGCCCGCACGCGCGCGCGCGAATAAGAATAAGAATAAGTAATAAG
AATAAGAATAAGAAAAAGAAAAAAAAAAAAAAAAAAAAAAAACAAAAACTCCATAGAGTT
GTTTTCTCAATCGGGTCCGAGGAATCGTCGATCTGGACTTGGAATCGTCGAGAAAAGTTT
ACCGGGTCCGAAAATTTGTCGACCAGGAGTGGAAATCGTCGAGAAAAATCTATCGGGTCC
GAGGAATCGTCGACCAGGACGAGGAATCGTCGACCGGGTCCGAGGATTTGTCGACCAGGG
GTTGAAATAGTCGACCAGGTCCGAGACTTCATCGACCGGGTCCGAGGAATCGTCGACCAG
GAGTGGAAATCGTCGAGAAAAATCTATCGGGTCCGAGGAATCGTCGACCAGGACGAGGAA
TCGTCGACCGGGTCCGAGGATTTGTCGACCAGGTCCGAGACTTCATCGACCGGGTCCGAG
GATTCGTCGACCAGGTCCGAGACTTCATCGACCGGGTCCAAGTATTTGATTTTATTTTGG
AACCGGTGTCTCCTCAGACATTTCAATGTATGTTGGTGCCAAGAGGGAAAAGGGCTATAA
AGCTATATAGGGGTGGGTGTGTGTAGTGGGAATTTTGCCCGCACGCGCGCGCGCGATAAG
AATAAGAATAAGTAATAAGAATAAGAATAAGAAAAAGAAAAAAAAAAAAAAAAAAACAAA
AACAAAAACTCCATAGAGTTGTTTTCTCAATCGGGTCCGAGGAATCGTCGATCTGGACTT
GGAATCGTCGAGAAAAGTTTACCGGGTCCGAAAATTTGTCGACCAGGAGTGGAAATCGTC
GAGAAAAATCTATCGGGTCCGAGGAATCGTCGACCAGGACGAGGAATCGTCGACCGGGTC
CGAGGATTTGTCGACCAGGGGTTGAAATCGTCGACCAGGTCCGAGACTTCATCGACCGGG
TCCGAGGAATCGTCGACCAGGACGATGAATGGTCGATGAAAATCTATCGGGTTCGAGGAA
TGGTCGACCAGGGGTTGAAATCGTCGACCAGGTCCGAGACTTCATCGACCGTGTCCGAGG
AGTGGTCGAGGGTTTGTCGACCAGGACGAGGAATCGTCGACCGGGTCCGAGGATTTGTCG
ACCAGGGGTTGAAATCGTCGACCAGGACCGAGAATTCGTCGACCAGGACGGCGGAACCCT
CGACCAGGACGATGAATGGGCGATGAAAATCTATCGGGTTCGAGGAATGGTCGACCAGGG
GTTGAAATCGTCGACCAGGTCCGAGACTTCATCGACCGGGTCCGAGGATTCGTCGACCAG
GACGGCCGGATGTCCGAGAAAAAAAAATGTTGCCGAATAACTTTCGAAAATCATTGGATA
TGATGCAATGTTTTGTGATCGAATCTCTTAAAATACATCAATAAAGAGTTTAGGATGTCA
AGTTTGCATCAAATATGCCCACGGAGCCCCAACTAGACCATGAAAATCCGATGTTGTATC
AGGTCAAATGACCTAGCTAGAGGTGTCAAAAAATTATGAAAATTTACCAGAAAATAGGAT
TTAGTATCCTTATGATGCATGCCAAAAAGAATTTTCAAATTCCAAGTATTTCTTTTTTCT
TGGCACCGGTGTCTCCTCAGACATTTCAATGTCTGTTGGTGCCAAGAGGGAAAAGGGCTA
TTAAGCTATATAGGGGGGTGGGTGTTGAGGGAGTCTGGGCAGTCCGTGGGGAACCCCCTT
TTTCGGTTCGGACTTGGGTAGCGATCGAGGGATGGTATCGGATATCGGCACGAGGAATGA
CCGACCGTCCGGCCGCCGGGATTTTCGCCGGAAAACTTTTCCGGGCACTTTTCCGGCGAT
CGGTTTTGTTGCCTTTTTCCGAGTTTTCTCAGCAGTTCTCGGACAAAAACTGCTGAATCG
TCGAGGAGAATGGGCTTGCTTGCGTGGGCTGCCATTAGTTCTTCGAGGCGTTAGGGTGGC
GGCGGTATAAAAGTGTCGGAGTTTTTTCAGCAGTTCTCGGACAAAAATTGCTGAGTGGCC
GAGAAGAATGGGCGTGTCATGCGTGGGCTGACATGGATTCTTCGAGGCCTAGGGGTGGCG
GTATATAACTTGTTCGCATGATATTACCGAGATGTCCCCACGGGCATCTTTTCACCTCGT
CGCCGAAGAGAATGGGCGTGTCATGGCATGGGCTGACATGGATTCTCCTAGGCCGTTTGG
GTGGCGGTATAGTCGTCTTGCGCACGAAATACCGAGATGTCCCCATGGGCATCGATTCCA
CCCGCCTAGGTTGGATGGGCGTGCTTCGTCGGAAAGCATGGATCCGCCTAGGCTGTCCCG
AGTGTGAGCGAGGTGTGAGTGTCGCCCATGGGCATCGACACCTTGCGGCTAGGAACTGGA
ACGAGACGGGTGGCAAAGATTTCGAGTAGCACTTCATACTACCGTGGGTTTTTTAAACCT
TCCGAGTTTTGTTGATGTTATTCCGAGAATTAGCAAACCGTAACGAAGATGTTCTTGGCA
ACCATCTTTTGATGGGAGTCCGGCTGTTCGATAGCCGGCCAAGGGTGATGAACGAAATGT
GAACCCTTGTCTCGCCTAGGTTGGATGGGCGTGCTTCGTTGGAAAGCATGGATCCGCCTA
GGCTGTCCCGAGTGTGAGCGAGGTGTGAGTGTCGCCCATGGGCATCGACACCTTGCGGCT
AGGAACTGGAACGAGACGGGTAGCAAAGATTTCGAGTAGCACTTCATACTACCGTGGGTT
TTTTAAACCTTCCTAGTTTTGTTGATGTTATTCCGAGAATTAGCAAACCGTAACGAAGAT
GTTCTTGGCAACCATCTTTTGATGGGAGTCCGGCTGTTCGAAAGCCGGCCAAGGGTGATG
AACGAAATGTGAACCCTTGTCTCGCCTAGGTTGGATGGGCGTGCTTCGTTGGAAAGCATG
GATCCGCCTAGGCTGTCCCGAAGTATCTCGCGCTTGTACGGCTTTGGCTCGGATTCGTCC
GTCTTCTTTCTTCTTAGCCGAGTACTTCGGTAGATTAGTTGGAACGATTGATGATTTTGA
GTTAATTGAACGTTCGGCGTATGAGTGGTGATCGGATAGCTAGTGTTCGTAGGCTCCATG
CTCGCGCATCGAACTACCTACCACCTATCCTTCTCAGTTAATTCACGGGCGATGTTACGC
TCGATGATGAGTTCCGGGGCCTGTGTTTCGTACCTAATTTGAAGGAATTGTTGAGTTTGG
TTTACACCTTTGCCCGCGGCTTCTCCTTCGTGGGGAAGTCGTGGGCTCAAACATCGGCGC
TTGTTCACCTCTCGTCATCGCATTTGTTGCCTTGCTCGCATTGGTGAATGAGTTGCGGGT
TGAAATCTCGGATGCGGAAAAGTTGTCGACGGTGACTCGAAGTGATTCAGTCCCGCCAAA
GCTCATCCGTCCTTCGGGCAAAAGATGACGGTCAAGACCTCGTCCTTTCTCTCTTTCCAT
TGCGTTTGAGAGGATGTGGCGGGGAATTGCCGTGATCGATGAATGC