Repetitive DNA elements found in the A. thaliana genome

Entries in this table are organized by their Classification. These entries are also organized by Identification #.

Identification # Repeat sequence name Classification
ATR0017 AR31 160-bp
ATR0018 AR32 160-bp
ATR0019 AR33 160-bp
ATR0001 AL1a 180-bp
ATR0002 AL1b 180-bp
ATR0003 AS1 180-bp
ATR0004 AS2 180-bp
ATR0005 AR11 180-bp
ATR0006 AR12 180-bp
ATR0007 AR13 180-bp
ATR0008 AR14 180-bp
ATR0009 pAtMr1 180-bp
ATR0010 pAtT28 180-bp
ATR0011 pAtT29 180-bp
ATR0012 AR21 500-bp
ATR0013 AR22 500-bp
ATR0014 pAtT20 500-bp
ATR0015 pAtT24 500-bp
ATR0016 pAtT25 500-bp
ATR0020 mil67 centromeric
ATR0021 164A centromeric
ATR0022 163A centromeric
ATR0023 278A centromeric
ATR0024 pAtT27 centromeric on chr. I
ATR0033 Athila retroelement centromeric retrotransposon
ATR0034 Athila 180-bp repeat, clone H12 centromeric retrotransposon
ATR0035 Athila 180-bp repeat, clone H2 5'-end centromeric retrotransposon
ATR0036 Athila 180-bp repeat, clone H2 3'-end centromeric retrotransposon
ATR0037 Athila 180-bp repeat, clone H33 centromeric retrotransposon
ATR0063 T5H22 chromomeric repeat chromomeric
ATR0052 T3F12 putative LINE LINE
ATR0044 106B LTR
ATR0046 74A microsatellite
ATR0051 arabms1 minisatellite minisatellite
ATR0058 T32N15 minisatellite minisatellite
ATR0057 T32N15 MITES-like repeat 1 MITES
ATR0061 T32N15 MITES-like repeat 2 MITES
ATR0050 11B7RE paracentromeric
ATR0038 Ta1 transposon retrotransposon
ATR0043 TSCL retrotransposon retrotransposon
ATR0059 T32N15 del-like retrotransposon retrotransposon
ATR0025 5S rDNA ribosomal
ATR0026 10.5 kbp rDNA repeat ribosomal
ATR0027 18S rDNA ribosomal
ATR0028 intergenic spacer between 18S and 5.8S rDNAs ribosomal
ATR0029 5.8S rDNA ribosomal
ATR0030 intergenic spacer between 5.8S and 25S rDNAs ribosomal
ATR0031 25S rDNA ribosomal
ATR0032 intergenic spacer between 25S and 18S rDNAs ribosomal
ATR0056 T17A5 solo LTR solo LTR
ATR0045 Telomeric repeat unit telomeric
ATR0039 Tat1a transposon transposon
ATR0040 Tat1b transposon transposon
ATR0041 Tat1c transposon transposon
ATR0042 Tag1 transposon transposon
ATR0047 191A unclassified
ATR0048 182A unclassified
ATR0049 15C8LE unclassified
ATR0053 T3F12 repeat from 23801 to 26400 unclassified
ATR0054 T3F12 repeat from 62182 to 62530 unclassified
ATR0055 T17A5 repeat from 54001 to 54670 unclassified
ATR0060 T32N15 repeat from 12951 to 13621 unclassified
ATR0062 T18A10 repeat from 9736 to 10416 unclassified
     
     

This database was last updated on 24 Mar 1999